Analyzing Docking Runs - English

150 visits



Outline:

Open dlg file on the ADT panel. Open and visualize conformations of ligand on ADT panel. Analyze the binding energies of various conformations. Change the display of ligand to sticks Change the color of atoms in ligand. Change the display of receptor to cartoon. Change the color of residues in the receptor. Analyze clusters of conformations. Open dlg file with a text editor and analyze the data. Export the most favorable docking pose as pdb file.