The Tutorials in this series are created using gromacs 2021.2 on Windows 10 OS Ubuntu Linux version 20.04 OS. Gromacs is an open source software to perform Molecular Dynamics (MD) simulation. It is popularly used in MD simulations of biological macromolecules and in polymer studies. 3D conformational space for macromolecules are generated for user analysis in the simulations. Structural coordinates for the individual atoms in a molecule, duration and sampling interval for MD, and force field details, are some of the inputs that are utilized, to calculate atomic interactions, associated energies, and conformational trajectories. Read more
Foss : Gromacs - English
Outline: About temperature and pressure of the system Need for equilibration before the start of the MD simulation nvt.mdp and npt.mdp files Commands for NVT or temperature equilibration..
Outline: Load and play a trajectory file in VMD Settings to play and view trajectory About Timestep in Drawing method Display select specified frames Create new representation Notice ..
Outline: About input file for MD Timescale of motions Time taken for MD Run MD for 1ns About Output files About Data Analysis, PCA, energetics About xtc trajectory file View trajecto..
Foss : GUI in Scilab - English
Outline: Learn about GUI and its benefits. What are objects? What is a pushbutton? What is a callback function? Use of a graphic window. About figure function. About ui..
Outline: *Learn about GUI Builder Toolbox, *Install GUI Builder Toolbox, *About GUIBuilder Palette, *Adding a pushbutton, *What is Tag, *What is String, *Adding a Pushbutton to a GUI ..
Outline: *About an Edit box, *About a Text box, *How to open an existing GUI, *Adding Tag and String, *Adding an Edit box to GUI, *Adding a Text box to GUI, *About string command, *..
Outline: *How to change the Background color, *How to change the Font angle of the string, *How to change the Font size of the string, *How to change the Font weight of the string, *How..
Outline: * Learn about an exponent calculator, * Adding Edit box for base to take user input, * Adding Edit box for exponent to take user input, * Adding a Text box to display the output..
Outline: *About Linear equation of a line, *What are Axes, *Use of Edit box for taking user input for a, b and c, *Use of Text box for displaying the slope and y-intercept, *Use of Push..
Outline: * Learn about basic plotting in GUI * About Checkbox, * Adding Checkbox for sine function, * Adding Checkbox for cosine function, * Adding an Axes to display the response of a ..
Outline: * Learn about an interest calculator, * About Radiobutton, * Adding Edit box for principal to take user input, * Adding Edit box for rate of interest to take user input, * Addi..
Outline: * About parametric form of a circle, * About a Slider, * Add a Slider to vary the value of a radius, * Add a Text box for displaying the value of radius, * Add an Axes to displ..
Outline: * About parametric form of a sphere, * Using a Slider to vary the value of a radius, * Using a Text box for displaying the value of radius, * Using an Axes to display the plot, ..
Foss : HTML - English
Outline: HTML Overview About HTML The content available in various tutorials in this series My First HTML Program Elements, Tags and Attributes Formatting Tags Styles..
Outline: My First HTML Program: Structure of an html document Write a sample html program html, head & body sections title tag H1 heading tag Save the html program .html and .htm ..
Outline: Elements, Tags and Attributes in HTML: Elements Empty elements Nested elements Tags Self Closing Tags Attributes Common Attributes Single and Double Quoted Attributes Br..
Outline: Formatting Tags Text Formatting Tags -Paragraph -Heading -Bold -Italic -Small -Underline -Delete -Insert -Super Script -Sub Script Break Tag Horizontal Ruler Anch..
Outline: Styles and CSS Inline style, Style Attribute, Style tag, CSS, Common Style Attributes: - text align, - font-family, - font-size, - colour, - Background Colour, ..
Outline: Lists in HTML What is list? Types of List: - Ordered List - Unordered List - Description List List Attributes - Ordered List Types - Unordered List styles N..
Outline: Tables in HTML Tables Table Elements: - caption - table row - table heading - table definition Table Attributes: - Spacing - Padding - Border - Width -..